Covstrain - South Africa

covstrain

South Africa (ZAF) 🇿🇦

Republic of South Africa / République d'Afrique du Sud / 南アフリカ共和国 /

SARS-CoV-2 variant sequences

The graph below presents the distribution of SARS-CoV-2 variant sequences over time, disaggregated by variants of concern (VOC), variants of interest (VOI), and variants under monitoring (VUM). Untracked variants are classified under the 'Other' category.

Figure 1: Distribution of SARS-CoV-2 Variant Sequences in South Africa

SARS-CoV-2 lineages

Select one or more SARS-CoV-2 Pango lineages using the tool below to view their prevalence over time.

Lineage referenceReference

Available lineages (scroll to view more):

Selected lineages:

Note on potential biases

Please note, samples may be subject to bias resulting from:

geographical clustering in submission of sequences;
demographic clustering in submission of sequences; and,
mutation clustering arising from prioritised sequencing of samples with particular mutations

Recommended citation

Hassan R. S. Andrabi. 2022. "CoVstrain: Sequencing Distributions of SARS-CoV-2 Mutations of Interest." https://covstrain.com/

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Last updated:

08 Aug 2022